Positions
- Assistant Professor
-
Biochemistry
Baylor College of Medicine
77578, Texas United States
- Member
-
Dan L Duncan Comprehensive Cancer Center
Baylor College of Medicine
Houston, Texas United States
Addresses
- BCM-Cullen Building (Office)
-
108CB
Houston, TX 77030
United States
Phone: (713) 798-8699
Education
- Advanced Training from Baylor College of Medicine
- 04/2014 - Houston, Texas United States
- Molecular and Cellular Biology
- Ph.D. from Baylor College of Medicine
- 10/2009 - Houston, Texas United States
- Molecular and Cellular Biology
- B.S. from University of Wisconsin
- 05/2002 - Greenbay, Wisconsin United States
- Biology, Chemistry (Majors); Mathematics, Human Biology (Minors)
Honors & Awards
- Chair's Scholar
- Baylor College of Medicine (01/2003)
- 2005 Anthony R. Means Award for Academic Excellence
- Baylor College of Medicine (01/2005)
Professional Interests
- Mass Spectrometry Proteomics
- Bioinformatics
- Cancer
- Gene Expression and Regulation
- Chromosomes, Chromatin, and DNA Biology
- Molecular Basis of Human Disease and Behavior
Websites
Selected Publications
- Kutzera J1, Hoefsloot HC, Malovannaya A, Smit AB, Van Mechelen I, Smilde AK. "Inferring protein-protein interaction complexes from immunoprecipitation data." BMC Res Notes.. 2013 15;6:468. Pubmed PMID: 24237943
- Foulds CE1, Feng Q, Ding C, Bailey S, Hunsaker TL, Malovannaya A, Hamilton RA, Gates LA, Zhang Z, Li C, Chan D, Bajaj A, Callaway CG, Edwards DP, Lonard DM, Tsai SY, Tsai MJ, Qin J, O'Malley BW. "Proteomic analysis of coregulators bound to ERα on DNA and nucleosomes reveals coregulator dynamics." Mol. Cell. 2013 Jul 25;51(2):185-99. Pubmed PMID: 23850489
- Ding C1, Chan DW, Liu W, Liu M, Li D, Song L, Li C, Jin J, Malovannaya A, Jung SY, Zhen B, Wang Y, Qin J. "Proteome-wide profiling of activated transcription factors with a concatenated tandem array of transcription factor response elements.." Proc Natl Acad Sci. 2013 Apr 23;110(17):6771-6. Pubmed PMID: 23553833
- Liu Q1, Ding C, Liu W, Song L, Liu M, Qi L, Fu T, Malovannaya A, Wang Y, Qin J, Zhen B. "In-depth proteomic characterization of endogenous nuclear receptors in mouse liver.." Mol Cell Proteomics. 2013 Feb;12(2):473-84. Pubmed PMID: 23197792
- Ramakrishnan R, Liu H, Donahue H, Malovannaya A, Qin J, Rice AP "Identification of novel CDK9 and Cyclin T1-associated protein complexes (CCAPs) whose siRNA depletion enhances HIV-1 Tat function." Retrovirology. 2012 30;9:90. Pubmed PMID: 23110726
- O'Malley BW, Malovannaya A, Qin J. "Minireview: nuclear receptor and coregulator proteomics--2012 and beyond." Mol Endocrinol.. 2012;26(10):1646-50. Pubmed PMID: 22745194
- Mazloom AR, Dannenfelser R, Clark NR, Grigoryan AV, Linder KM, Cardozo TJ, Bond "Recovering protein-protein and domain-domain interactions from aggregation of IP-MS proteomics of coregulator complexes." PLoS Comput Biol.. 2011;7(12):e1002319. Pubmed PMID: 22219718
- Ding C, Li Y, Kim BJ, Malovannaya A, Jung SY, Wang Y, Qin J. "Quantitative analysis of cohesin complex stoichiometry and SMC3 modification-dependent protein interactions." J Proteome Res.. 2011 Aug 5;10(8):3652-9. Pubmed PMID: 21699228
- Malovannaya A1, Lanz RB, Jung SY, Bulynko Y, Le NT, Chan DW, Ding C, Shi Y, Yucer N, Krenciute G, Kim BJ, Li C, Chen R, Li W, Wang Y, O'Malley BW, Qin J. "Analysis of the human endogenous coregulator complexome." Cell. 2011 May 27;145(5):787-99. Pubmed PMID: 21620140
- Malovannaya A1, Li Y, Bulynko Y, Jung SY, Wang Y, Lanz RB, O'Malley BW, Qin J. "Streamlined analysis schema for high-throughput identification of endogenous protein." Proc Natl Acad Sci U S A. 2010 Feb 9;109(6):2431-6. Pubmed PMID: 20133760
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