Mahbubur Rahman, Ph.D.
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Mahbubur Rahman, Ph.D.
Biostatistician
Positions
- Biostatistician
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Medicine - Health Services Research
Baylor College of Medicine
Houston, US
- Postdoctoral Researcher
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University of Texas Medical Branch Galveston
Galveston, Texas United States
• Designed and developed simulation software modules (R / C++) to quantify the protein turnover rate in the mass spectrometry data sets. • Enhanced the feature of the existing software package to handle large amount mass spectrometry data. • Analyzed large amount of mass spectrometry data and then applied quantitative, machine learning models to infer important information regarding the protein turnover, genetic influence on the protein turnover etc.
- Data Science Technical Expert
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Chegg
Fremont, California United States
• Mentored students in the data science courses. • Graded data science assignments, including machine learning, deep learning projects.
- Machine Learning Engineer
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GeminiData
San Francsico, California
• Designed and developed algorithms to extract distinguishable features from the unstructured data sets while applying machine learning models. • Incorporated open-source software packages in the cloud.
- Software Engineer
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VizExplorer
San Diego, California
• Developed data driven analytical software modules to improve the business intelligence. • Developed pattern recognition algorithms based on time course data from different database resources. • Developed a software prototype to map a conversational statement to a query statement while using the machine learning / deep learning models.
Education
- PhD from University of Houston
- 05/2015 - Houston, Texas
- Computational Modeling, Machine Learning
- MSc from Texas Tech University
- 12/2010 - Lubbock, Texas United States
- Computer Science, Machine Learning
- BSc from Bangladesh University of Engineering and Technology
- 12/2006 - Dhaka, Dhaka Bangladesh
- Computer Science and Engineering
Certifications
- Houston VAMC
- Udacity Deep Learning Online Nano Degree Certificate
- Udacity
- A comprehensive certification on different machine learning, deep learning technologies as deep neural network, recurrent neural network, convolutional neural network, generative adversarial network.
Honors & Awards
- Udacity Deep Learning Online Nano Degree Certificate
- Udacity (07/2018 - 12/2018)
Professional Statement
I am a machine learning data engineer at the Baylor College of Medicine (BCM), Center for Innovations, Quality, Effectiveness & Safety (IQuESt) and research coordinator at the Michael E. DeBakey VA Medical Center (MEDVAMC). My background is in computer science and engineering and experience and expertise is in data mining using machine learning, deep learning algorithms, high performance computing. I have been designing, developing data analytical based decision providing systems through my academic and industry career for the last ten years. I worked in artificial intelligence focused research projects funded by NSF, NIH during my Masters, PhD and Post-doctoral appointments and published related results in six peer reviewed journals, two conferences and one book chapter. I am very much excited and interested to have a career in data mining, machine learning, deep learning focused positions.Websites
Selected Publications
- M.Garbey, M.Rahman, S.Berceli "A Multiscale Computational Framework to Understand Vascular Adaptation." Journal of Computational Science. 2015;
- Mahbubur Rahman "A novel index-based multidimensional data organization model that enhances the predictability of the machine learning algorithms." 6th international conference on data mining (DTMN’20). 2020;
- Rovshan G. Sadygov, Jayant Avva, Mahbubur Rahman, Kwanwong Lee, Sergei Ilchenko, Takhar Kasumov, Ahmad Borzou "an Automated software for in vivo Protein Turnover Analysis using Heavy water Labeling and LC-MS." Journal of Proteome Research. 2018;
- Mahbubur Rahman, Mustafa Duran "Deep Learning in Instructional Analysis, Design, Development, Implementation, and Evaluation." Applications of Machine Learning and Artificial Intelligence in Education, IGI global publishers. 2021;
- "Gaussian Process Model of Protein Turnover." Journal of Proteome Research. 2016;
- H.Wu, M.Rahman, J.Wang, U.Lourderaj, W.L.Hase, Y.Zhuang "Higher Accuracy Schemes for approximating the Hessian from Electronic Structure Calculations in Chemical Dynamics Simulations." Journal of Chemical Physics. 2010;133(7)
- Mahbubur Rahman "Nearest Neighbor Searching in High Dimensional Space using Efficient Database Indexing." Conference on Innovations In Computing And Engineering Machinery, CICEM. 2011;
- "Predicting the protein half-life in the tissue level from the cellular level." PloS One: Computational Biology. 2017;
- Rahman, M., Nowakowski, S., Agrawal, R., Naik, A., Sharafkhaneh, A., & Razjouyan, J. "Validation of a Natural Language Processing Algorithm for the Extraction of the Sleep Parameters from the Polysomnography Reports." Healthcare. 2022;
Projects
- Natural Language Processing algorithm for the extraction of the sleep parameters from the Polysomnography report
- Baylor College of Medicine (01/2022 - present)
- Natural Language Processing algorithm for the extraction of the home sleep apnea parameters from the Home Sleep Apnea Testing reports.
- Baylor College of Medicine, Center for Innovations in Quality, Effectiveness and Safety, Houston, TX 77030, USA (08/2022 - 03/2023)
- A rule based multilevel NLP model for Automated Central and Mixed Apnea related Parameter Extraction from PSG reports.
- Baylor College of Medicine, Center for Innovations in Quality, Effectiveness and Safety, Houston, TX 77030, USA (06/2023 - 09/2023)
Skills
- Software Development Engineer
- Machine Learning Data Engineer
- Deep Learning Research and Development
Languages
Bengali, Arabic
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