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Research

NGS Platforms

Master
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Illumina’s iSeq, NextSeq and NovaSeq systems' powerful combination of read-length and paired-end flexibility enables the broadest range of genomic sequencing applications. Illumina's robust sequencing chemistry supports a wide range of read lengths, allowing researchers to tailor each run to meet their needs with shorter turnover times.

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Illumina Sequencing Instrument Specifications
InstrumentiSeq 100 SequencerNextSeq 500 SequencerNextSeq 500 SequencerNovaSeq 6000 SequencerNovaSeq 6000 SequencerNovaSeq 6000 SequencerNovaSeq 6000 Sequencer
ModeRegularMid OutputHigh OutputSP FCS1 FCS2 FCS4 FC
Output (Max.)1.2 Gb - 2x150bp

32.5-39 Gb - 2x150bp

16.25-19.5 Gb - 2x75bp

100-120 Gb - 2x150bp

50-60 Gb - 2x75bp

25-30 Gb - 1x75bp

400 Gb - single FC500 Gb - single FC

 

1250 Gb - single FC

 

3000 Gb - single FC
Run Time17.5 hours15 - 26 hours11 - 29 hours13 - 38 hours13 - 25 hours16 - 36 hours45 hours
Single End Reads (Max.)Up to 4 Million

Up to 130 Million

 

Up to 400 Million

 

800 Million1.6 Billion4.1 Billion10 Billion
Paired End Reads (Max.)Up to 8 MillionUp to 260 MillionUp to 800 Million1.6 Billion3.2 Billion8.2 Billion20 Billion
Read Length (Max.)2 x 150 bp2 x 150 bp2 x 150 bp2 x 250 bp2 x 150 bp2 x 150 bp2 x 150 bp
Bases above Q30> 80%

>75% (2 x 150 bp)

>80% (2 x 75 bp)

 

>75% (2 x 150 bp)

>80% (2 x 75 bp)

>80% (1 x 75 bp)

≥85% (2 x 50 bp)

≥75% (2 x 150 bp)

≥75% (2 x 250 bp)

≥85% (2 x 50 bp)

≥80% (2 x 100 bp)

≥75% (2 x 150 bp)

≥85% (2 x 50 bp)

≥80% (2 x 100 bp)

≥75% (2 x 150 bp)

≥85% (2 x 50 bp)

≥80% (2 x 100 bp)

≥75% (2 x 150 bp)

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Gb = gigabases, bp = base pair

1 Flow Cell (FC) = 8 Lanes

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For more information about these instruments see: