Mary Dickinson Lab

Dickinson Publications


Jang, C-W., Gao, L., Dickinson, M.E. and Behringer, R.R. (2010) Bmp4 expression pattern in developing hair follicles observed with a nuclear cyan fluorescent protein knock-in allele in the mouse. Int J Dev Biol., 54, 931-8.

Moon JJ, Saik JE, Poché RA, Leslie-Barbick JE, Lee SH, Smith AA, Dickinson ME, West JL. (2010) Biomimetic hydrogels with pro-angiogenic properties. Biomaterials, 31, 3840-7. PMCID:PMC2839536

Poché, R.A., Saik, J.E., West, J.L. and Dickinson, M.E. (2010) The mouse cornea as a transplantation site for live imaging of engineered tissue constructs. Cold Spring Harbor Laboratory Protocols, Apr;2010(4):pdb.prot5416. PMCID:PMC3057363

Culver, J.C. and Dickinson, M.E. (2010) The effects of hemodynamic force on embryonic development. Microcirculation, 17, 164-78. PMCID:PMC2927969

Armstrong, J.J., Larina, I.V., Dickinson, M.E., Zimmer, W.E. and Hirschi, K.K. (2010) Characterization of Bacterial Artificial Chromosome Transgenic Mice Expressing Red Fluorescent Protein Substituted for the Murine Smooth Muscle Alpha Actin Gene. Genesis, 48, 457-63. PMCID:PMC2906650

Kazanis, I., Lathia, J.D., Vadakkan, T.J., Raborn, E., Wan, R., Mughal, M.R., Eckley, D.M., Sasaki, T., Patton, B., Mattson, M.P., Hirschi, K.K., Dickinson, M.E., and ffrench-Constant, C. (2010) Quiescence and activation of stem and precursor cell populations in the subependymal zone of the mammalian brain are associated with distinct cellular and extracellular matrix signals. J. Neuroscience, 30, 9771-81. PMCID:PMC3842479

Chao, W-T., Ashcroft, F., Daquinag, A.C., Vadakkan, T., Wei, Z., Zhang, P., Dickinson, M.E., and Kunz, J. (2010) Type I phosphatidylinositol phosphate kinase beta regulates focal adhesion disassembly by promoting beta1 integrin endocytosis. Mol Cell Biology, 30, 4463-79. PMCID:PMC2937533

Cabrera, R., Sha, Z., Vadakkan, T.J., Otero, J., Kriegenburg,F., Hartmann-Petersen, R., Dickinson, M.E. and Chang, E.C. (2010) Proteasome nuclear import mediated by Arc3 can influence efficient DNA damage repair and mitosis in Schizosaccharomyces pombe. Mol. Biol. Cell 21:3125-36. PMCID:PMC2938379

Udan, R.S. and Dickinson, M.E. (2010) Imaging Mouse Embryonic Development. In, Methods in Enzymology. P. Soriano and P. Wasserman, Eds. 476, 329-349.

Saik, J.E., Gould, D.J., Watkins, E.M., Dickinson, M.E. and West, J.L. (2011) Covalently Immobilized Platelet Derived Growth Factor-BB Promotes Angiogenesis in Biomimetic Poly(ethylene glycol) Hydrogels, Acta. Biomat. 7,133-43.

Gould, D.J., Vadakkan, T.J., Poché, R.A. and Dickinson, M.E. (2011) Multifractal and lacunarity analysis of microvascular morphology and remodeling. Microcirculation 18:136-151. PMCID:PMC3049800

Sudheendran, N., Syed, S.H., Dickinson, M.E., Larina, I.V. and Larin, K.V. (2011) Speckle variance OCT imaging of the vasculature in live mammalian embryos. Laser Physics Letters, 8, 247-252

Syed, S.H., Larin, K.V., Dickinson, M.E. and Larina, I.V. (2011) Optical coherence tomography for high-resolution imaging of mouse development in utero. J. Biomed. Opt., 16, 046004. PMCID:PMC3081861

Asprer, J.S.T., Lee, B., Wu, C-S, Vadakkan, T.J., Dickinson, M.E., Lu, H-C and Lee, S-K. (2011) LMO4 functions as a coactivator of Neurogenin2 in the developing cortex. Development, 138, 2823-32. PMCID:PMC3109604

Garcia, M.D., Udan, R.S, Hadjantonakis, A.K. and Dickinson, M.E. (2011) Live imaging of mouse embryos. Cold Spring Harbor Laboratory Protocols, Apr 1;2011:pdb.top104.

Garcia, M.D., Udan, R.S, Hadjantonakis, A.K. and Dickinson, M.E. (2011) Time-lapse imaging of post-implantation mouse embryos. Cold Spring Harbor Laboratory Protocols, Apr 1;2011: prot5595.

Garcia, M.D., Udan, R.S, Hadjantonakis, A.K. and Dickinson, M.E. (2011) Preparation of post-implantation mouse embryos for imaging. Cold Spring Harbor Laboratory Protocols, Apr 1;2011: prot5594.

Garcia, M.D., Udan, R.S, Hadjantonakis, A.K. and Dickinson, M.E. (2011) Preparation of rat serum for culturing mouse embryos. Cold Spring Harbor Laboratory Protocols, Apr 1;2011: prot5593.

Leslie-Barbick, J.E., Saik, J.E., Gould, D.J., Dickinson, M.E. and West, J.L. (2011) The promotion of microvasculature formation in poly(ethylene glycol) diacrylate hydrogels by an immobilized VEGF-mimetic peptide. Biomaterials, 32, 5782-9.

Saik, J.E., Gould, D.J., Keswani, A.K., Dickinson, M.E. and West, J.L. (2011) Biomimetic Hydrogels with Immobilized EphrinA1 for Therapeutic Angiogenesis. Biomacromolecules, 12, 2615-22.

Salisbury, E., Rodenberg, E., Sonnet, C., Hipp, J., Gannon, F., Vadakkan, T.J., Dickinson, M.E., Olmsted-Davis, E.A. and Davis, A.R. (2011) Sensory Nerve Induced Inflammation Contributes to Heterotopic Ossification. J. Cell Biochem. 112, 2748-58. PMCID:PMC3329372

Yoo, J., Larina, I.V., Larin, K.V., Dickinson, M.E., and Liebling, M. (2011) Increasing the field-of-view of dynamic cardiac OCT via post-acquisition mosaicism without affecting frame-rate or spatial resolution. Biomedical Optics Express, 2, 2614-2622. PMCID:PMC3184870

Zhu, Y., Li, F., Vadakkan, T.J., Zhang, M., Landua, J., Wei, W., Cridebring, D., Ma, J., Dickinson, M.E., Rosen, J.M., Lewis, M.T. and Wong, S.T.C. (2011) Coupling Oriented Hidden Markov Random Field Model with Local Clustering for Segmenting Blood Vessels and Measuring Spatial Structures in Images of Cancer Stem Cells and Tumor Microenvironment, IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2011, 352-357.

Larina, I.V, Larin, K.V., Justice, M.J. and Dickinson, M.E. (2011) Optical Coherence Tomography for live imaging of mammalian development. Curr. Opin. Genet. Dev. 21, 579-84. PMCID:PMC3208256

Poché, R.A., Sharma, R., Garcia, M.D., Wada, A.M., Nolte, M.J., Udan, R.S., Paik, J.H., DePinho, R.A., Bartlett, J.D. and Dickinson, M.E. (2012) Transcription Factor FoxO1 Is Essential for Enamel Biomineralization. PLOS ONE, 7,e30357. PMCID:PMC3265481

Larina, I.V., Larin, K.V., Dickinson, M.E., Liebling, M. (2012) Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures, Biomedical Optics Express, 3, 650-660. PMCID:PMC3296549

Culver, J.C., Hoffman, J.C., Poché, R.A., Slater, J.H., West, J.L. and Dickinson, M.E. (2012) Three-Dimensional Biomimetic Patterning in Hydrogels to Guide Cellular Organization. Advanced Materials, 24,2343-8. Featured Article Frontispiece, Advanced Materials, 24, 2343.

Larina, I.V., Syed, S.H., Sudheendran, S.N, Overbeek, P.A, Dickinson, M.E., Larin, K.V. (2012) Optical Coherence tomography for live phenotypic analysis of embryonic ocular structures in mouse models. Journal of Biomedical Optics, 17, 081410-4. PMCID:PMC3397804.

Cuchiara, M.P., Gould, D.J., Dickinson, M.E., and West, J.L. (2012) Integration of Self-Assembled Microvascular Networks with Microfabricated PEG-Based Hydrogels,. Advanced Functional Materials, 22, 4511-4518. PMCID:PMC3607213

Wat, M.J., Yu, Z., Veenma, D., Garcia, M.D., Hernandez, A., Holder, A.M., Wat, J.J., Chen, Y., Dickinson, M.E., Tibboel. D., Klein, A., Lee, B., Scott, D.A. (2012) Mouse model demonstrates that SOX7 contributes to the development of congenital diaphragmatic hernias in individuals with recurrent deletions of 8p23.1. Human Molecular Genetics, 21, 4115-25.

Larina, I.V., Dickinson, M.E. (2012) In vivo Imaging of the developing mouse embryonic vasculature. Meth. Mol. Biol. 872, 205-15.

Bitner, B.R., Marcano, D.C., Berlin, J.M., Fabian, R.H., Cherian, L., Culver, J.C., Dickinson, M.E., Robertson, C.S., Pautler, R.G., Kent, T.A. and Tour, J.M. (2012) Carbon Particles Improve Cerebrovascular Dysfunction Following Traumatic Brain Injury. ACS Nano, 6, 8007-14. PMCID:PMC3458163

Udan, R.S., Culver, J.C., and Dickinson, M.E. Advances in vasculogenesis and angiogenesis. (2012) Wiley Interdiscip Rev Dev Biol. 2013 May;2(3):327-46.

Larina, I.V., Garcia, M.D., Vadakkan, T.J., Larin, K.V., and Dickinson, M.E. (2012) Imaging Mouse Embryonic Cardiovascular Development, Cold Spring Harb Protoc; 10:1035-43. pdb.top071498.

Culver, J.C., Vadakkan, T.J. and Dickinson, M. E. (2013) A specialized domain of low blood flow and hypoxia in the neural stem cell niche. PLOS ONE, 8(1):e53546. PMCID:PMC3538546

Goldberg, J.S., Vadakkan, T.J., Hirschi, K.K. and Dickinson, M.E. (2013) A computational approach to detect gap junction plaques and associate them with cells in fluorescence images. J Histochem Cytochem 61, 283-93. PMCID:PMC3636683

Bhat, S., Larina, I.V., Larin, K.V., Dickinson, M.E., and Liebling, M. (2013) 4D Reconstruction of the Beating Embryonic Heart From Two Orthogonal Sets of Parallel Optical Coherence Tomography (OCT) Slice-Sequences. IEEE Trans Med Imaging, 32(3):578-880.

Adams, D, Baldock, R, Bhattacharya, S, Copp, A, Dickinson, M, Greene, ND, Henkelman, M, Justice, M, Mohun, T, Murray, S, Pauws, E, Raess, M, Rossant, J, Weaver, T, West, D. (2013) Bloomsbury Report on Mouse Embryo Phenotyping: Recommendations from the IMPC Workshop on Embryonic Lethal Screening. Disease Models and Mechanisms, 6, 571-579.

Chintalgattu, V., Rees, M.L., Culver, J.C., Goel, A., Jiffar, T., Zhang, J., Dunner, K., Pati, S., Bankson, J.A., Pasqualini, R., Arap, W., Bryan, N.S., Taegtmeyer, H., Langley, R.R., Yao, H., Kupferman, M.E., Entman, M.L., Dickinson, M.E., Khakoo, A.Y. (2013) Coronary microvascular pericytes are the cellular target of sunitinib malate induced cardiotoxicity. Science Translational Medicine, 5(187):187ra69. PMCID:PMC3833098

Ali, S., Saik, J.E., Gould, D.J., Dickinson, M.E., and West, J.L. (2013) Immobilization of cell-adhesive laminin peptides in degradable PEGDA hydrogels influences endothelial cell tubulogenesis. Biores Open Access, 2(4):241-9. PMCID:PMC3731677.

Baird, B.N., Roybal, J.D., Chen, Y., Schliekelman, M.J., Gill, B.J., Mishra, D.K., Erez, B., O’Reilly, M., Yang, Y., Ahn, Y-H., Patel, M., Liu, X., Thilaganathan, N., Larina, I.V., Dickinson, M.E., West, J.L., Hanash, S., Gibbons, D.L., Liu, D.D., Kim, M.P., Hicks, J.M., Wistuba, I.I. and Kurie, J.M. (2013) Fibulin-2 is a driver of malignant progression in lung adenocarcinoma. PLOS ONE, 8(6):e67054. PMCID:PMC3677922.

Udan, R.S., Vadakkan, T.J. and Dickinson, M.E. (2013) Dynamic responses of endothelial cells to changes in blood flow during vascular remodeling of the mouse yolk sac. Development, 140(19):4041-50. PMCID:PMC3775417. Highlighted in the issue, “Vascular remodeling goes with the flow” Development 140:e1903; Editor’s Choice, “Growing vessels”, Science, 342 (6155), 11 Oct 2013.

Vadakkan, T.J., Landua, J., Bu, W., Wei, W., Wong, S.T.C., Dickinson, M.E., Rosen, J.M., Lewis, M.T., and Zhang, M. (2014) Wnt-responsive cancer stem cells are located close to distorted blood vessels, and not in hypoxic regions in a p53 null mouse model of human breast cancer, Stem Cells Translational Medicine, 7:857-66. PMCID:PMC4073819

Udan, R.S., Piazza, V.G., Hsu, C-W., Hadjantonakis, A.K., and Dickinson, M.E. Quantitative imaging of cell dynamics in mouse embryos using light sheet microscopy. Development, In press.